Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0450Putative multidrug efflux ABC transporter; Alternative locus ID: PMED4_04971. (274 aa)    
Predicted Functional Partners:
PMM0449
Putative multidrug efflux ABC transporter; Alternative locus ID: PMED4_04961.
 
 0.998
PMM0451
Possible Arenavirus glycoprotein; Alternative locus ID: PMED4_04981.
       0.818
PMM0447
Conserved hypothetical protein; Alternative locus ID: PMED4_04941.
 
   
 0.702
ctaB
Putative protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.612
PMM0443
Conserved hypothetical protein; Alternative locus ID: PMED4_04901.
 
     0.533
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.500
ctaE
Cytochrome c oxidase, subunit III; Alternative locus ID: PMED4_04911.
       0.437
cpeB
Phycobilisome protein; Green-light absorbing phycoerythrin of unknown function.
  
     0.436
cytM
Cytochrome cM; Alternative locus ID: PMED4_12031.
  
     0.425
PMM0124
Conserved hypothetical protein in cyanobacteria; Alternative locus ID: PMED4_01301; Belongs to the UPF0367 family.
  
     0.423
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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