Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| pcb | psaA | PMM0627 | PMM1524 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | 0.995 |
| pcb | psaB | PMM0627 | PMM1523 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I PsaB protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. | 0.996 |
| pcb | psaC | PMM0627 | PMM1607 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I subunit PsaC; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, [...] | 0.993 |
| pcb | psaD | PMM0627 | PMM1578 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I protein PsaD; Alternative locus ID: PMED4_17881. | 0.988 |
| pcb | psaE | PMM0627 | PMM0329 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I PsaE protein (subunit IV); Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. | 0.967 |
| pcb | psaF | PMM0627 | PMM0469 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I PsaF protein (subunit III); Alternative locus ID: PMED4_05171. | 0.982 |
| pcb | psaI | PMM0627 | PMM1520 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I subunit VIII (PsaI); Citation: van de Staay et al. (1998) Photosynthesis Research 57:183-191; Alternative locus ID: PMED4_17301. | 0.548 |
| pcb | psaJ | PMM0627 | PMM0468 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I PsaJ protein (subunit IX); May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. | 0.972 |
| pcb | psaK | PMM0627 | PMM0906 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I PsaK protein (subunit X); Alternative locus ID: PMED4_10171. | 0.964 |
| pcb | psaL | PMM0627 | PMM1519 | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | Photosystem I PsaL protein (subunit XI); Alternative locus ID: PMED4_17291. | 0.995 |
| psaA | pcb | PMM1524 | PMM0627 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Light-harvesting complex protein; The antenna complex functions as a light receptor, it captures and delivers excitation energy to photosystem II and possibly to photosystem I. The Prochlorales pcb genes are not related to higher plant LHCs. | 0.995 |
| psaA | psaB | PMM1524 | PMM1523 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Photosystem I PsaB protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6. | 0.999 |
| psaA | psaC | PMM1524 | PMM1607 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Photosystem I subunit PsaC; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, [...] | 0.999 |
| psaA | psaD | PMM1524 | PMM1578 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Photosystem I protein PsaD; Alternative locus ID: PMED4_17881. | 0.998 |
| psaA | psaE | PMM1524 | PMM0329 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Photosystem I PsaE protein (subunit IV); Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. | 0.997 |
| psaA | psaF | PMM1524 | PMM0469 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Photosystem I PsaF protein (subunit III); Alternative locus ID: PMED4_05171. | 0.997 |
| psaA | psaI | PMM1524 | PMM1520 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Photosystem I subunit VIII (PsaI); Citation: van de Staay et al. (1998) Photosynthesis Research 57:183-191; Alternative locus ID: PMED4_17301. | 0.908 |
| psaA | psaJ | PMM1524 | PMM0468 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Photosystem I PsaJ protein (subunit IX); May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family. | 0.997 |
| psaA | psaK | PMM1524 | PMM0906 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Photosystem I PsaK protein (subunit X); Alternative locus ID: PMED4_10171. | 0.997 |
| psaA | psaL | PMM1524 | PMM1519 | Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family. | Photosystem I PsaL protein (subunit XI); Alternative locus ID: PMED4_17291. | 0.997 |
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