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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0472Putative Na+/H+ antiporter, CPA1 family; Alternative locus ID: PMED4_05201. (399 aa)    
Predicted Functional Partners:
PMM1701
Putative chloride channel; Alternative locus ID: PMED4_19121.
 
  
 0.631
PMM0568
Putative CaCA family sodium/calcium exchanger; Alternative locus ID: PMED4_06171.
 
 
 
 0.595
hli20
Possible high light inducible protein; Has EXXNGXXAXXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_05191.
  
    0.498
tsaD
Probable o-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
    0.470
PMM0084
Possible sodium transporter, Trk family; Alternative locus ID: PMED4_00871.
  
 
 0.438
PMM1600
Putative Na+/H+ antiporter, CPA2 family; Alternative locus ID: PMED4_18101.
  
 
 0.430
PMM0916
Conserved hypothetical protein; Alternative locus ID: PMED4_10271.
   
 0.413
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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