Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMM0479Conserved hypothetical protein; Alternative locus ID: PMED4_05271. (369 aa)    
Predicted Functional Partners:
PMM0480
Conserved hypothetical protein; Alternative locus ID: PMED4_05281.
  
    0.751
PMM0481
Conserved hypothetical protein; Alternative locus ID: PMED4_05291; Belongs to the UPF0234 family.
  
    0.616
PMM1851
Conserved hypothetical protein; Alternative locus ID: PMED4_05301.
       0.570
PMM0573
Conserved hypothetical protein; Alternative locus ID: PMED4_06221.
  
     0.539
PMM0953
Conserved hypothetical protein; Alternative locus ID: PMED4_10631.
  
    0.536
som
Possible porin; Alternative locus ID: PMED4_07831; Belongs to the OprB family.
  
     0.514
PMM0478
Conserved hypothetical protein; Alternative locus ID: PMED4_05261.
  
    0.512
PMM0443
Conserved hypothetical protein; Alternative locus ID: PMED4_04901.
  
     0.499
pykF
Pyruvate kinase; Alternative locus ID: PMED4_10231; Belongs to the pyruvate kinase family.
  
  
 0.470
PMM0124
Conserved hypothetical protein in cyanobacteria; Alternative locus ID: PMED4_01301; Belongs to the UPF0367 family.
  
     0.453
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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