STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0487Conserved hypothetical protein; Alternative locus ID: PMED4_05361. (407 aa)    
Predicted Functional Partners:
PMM1571
Conserved hypothetical protein; Alternative locus ID: PMED4_17811.
 
 0.989
PMM1278
Putative circadian phase modifier CpmA homolog; Alternative locus ID: PMED4_14441.
 
  
 0.895
PMM0488
Conserved hypothetical protein; Alternative locus ID: PMED4_05371.
  
    0.825
PMM0486
Conserved hypothetical protein; Alternative locus ID: PMED4_05351.
  
    0.683
PMM0485
Conserved hypothetical protein; Alternative locus ID: PMED4_05341.
       0.605
pyrG
Glutamine amidotransferase class-I:CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
 
      0.575
xthA
Exodeoxyribonuclease III; Alternative locus ID: PMED4_05331.
       0.509
PMM1476
Aldo/keto reductase family; Alternative locus ID: PMED4_16851.
 
    0.422
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.