Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
futB,hitBPutative iron ABC transporter; Alternative locus ID: PMED4_05381. (531 aa)    
Predicted Functional Partners:
futC,
ABC transporter, ATP binding component, possibly iron transporter; Alternative locus ID: PMED4_08891.
 0.998
futA,sfuA,
Putative iron ABC transporter, substrate binding protein; Alternative locus ID: PMED4_13281.
 
 
 0.995
PMM0490
Conserved hypothetical protein; Alternative locus ID: PMED4_05391.
  
    0.780
PMM0491
4a-hydroxytetrahydrobiopterin dehydratase (PCD); Alternative locus ID: PMED4_05401.
       0.652
PMM0492
Conserved hypothetical protein; Alternative locus ID: PMED4_05411.
     
 0.648
cxp
Carboxypeptidase Taq (M32) metallopeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
       0.450
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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