STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0516Possible membrane associated protease; Alternative locus ID: PMED4_05651. (452 aa)    
Predicted Functional Partners:
PMM0517
Hypothetical protein; Alternative locus ID: PMED4_05661.
  
    0.659
ftsI
Putative peptidoglycan synthetase (pbp transpeptidase domain); Alternative locus ID: PMED4_05671.
  
    0.658
cobC
Possible alpha-ribazole-5'-P phosphatase; Phosphatase involved in the assembly of the nucleotide loop of cobalamin; Citation: O'Toole et al. (1994) J. Biol. Chem. 269:26503-26511; Alternative locus ID: PMED4_05641; Belongs to the phosphoglycerate mutase family.
  
    0.655
PMM0514
Putative dihydroorotase; Alternative locus ID: PMED4_05631.
  
    0.616
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
    0.539
PMM0500
Conserved hypothetical protein; Alternative locus ID: PMED4_05491.
  
     0.529
PMM0924
Conserved hypothetical protein; Alternative locus ID: PMED4_10351.
  
     0.514
PMM0604
Conserved hypothetical protein; Alternative locus ID: PMED4_06531.
  
     0.465
PMM0772
Conserved hypothetical protein; Alternative locus ID: PMED4_08571.
 
    0.460
PMM0450
Putative multidrug efflux ABC transporter; Alternative locus ID: PMED4_04971.
   
  
 0.434
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.