Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0531Creatininase; Alternative locus ID: PMED4_05801. (265 aa)    
Predicted Functional Partners:
codA
Possible cytosine deaminase; Alternative locus ID: PMED4_14711.
 
 
 0.972
PMM1303
Conserved hypothetical protein; Alternative locus ID: PMED4_14701.
     0.809
PMM0585
Conserved hypothetical protein; Alternative locus ID: PMED4_06341.
 
     0.712
PMM1659
Glycosyl transferase, family 2; Alternative locus ID: PMED4_18691.
  
  
 0.694
rps1b,
30S ribosomal protein S1 homolog B, putative Nbp1; Citation: Sugita, C., Sugiura, M. & Sugita, M. (2000) Mol. Gen. Genet. 263:655-663; Alternative locus ID: PMED4_05791.
       0.642
PMM0529
Conserved hypothetical protein; Alternative locus ID: PMED4_05781.
       0.641
PMM0528
DUF152; Alternative locus ID: PMED4_05771; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.636
PMM0532
Conserved hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
    0.610
PMM0533
Conserved hypothetical protein; Alternative locus ID: PMED4_05821.
       0.485
accA
acetyl-CoA carboxylase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
       0.484
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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