Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0547Conserved hypothetical protein; Alternative locus ID: PMED4_05961. (256 aa)    
Predicted Functional Partners:
csoS2
Carboxysome shell protein CsoS2; Alternative locus ID: PMED4_06011.
 
 
 
 0.896
PMM0554
Putative carboxysome peptide A; Alternative locus ID: PMED4_06031.
 
 
 
 0.879
PMM0555
Putative carboxysome peptide B; Alternative locus ID: PMED4_06041.
 
 
 
 0.878
csoS3
Carboxysome shell protein CsoS3; Alternative locus ID: PMED4_06021.
 
     0.782
csoS1
Carboxysome shell protein CsoS1; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.
 
 
 
 0.738
PMM0310
Carbohydrate kinase, FGGY family; Alternative locus ID: PMED4_03161.
  
     0.718
PMM0546
Conserved hypothetical; Alternative locus ID: PMED4_05951.
       0.636
chlB
Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
       0.472
chlN
Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.
       0.472
glgX
Putative isoamylase; Alternative locus ID: PMED4_14901; Belongs to the glycosyl hydrolase 13 family.
   
    0.412
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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