Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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rbcL,Ribulose bisphosphate carboxylase, large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (471 aa)    
Predicted Functional Partners:
rbcS,
Ribulose bisphosphate carboxylase, small chain; Alternative locus ID: PMED4_06001.
 
 0.999
csoS1
Carboxysome shell protein CsoS1; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered.
  
  
 0.970
csoS3
Carboxysome shell protein CsoS3; Alternative locus ID: PMED4_06021.
 
 
 0.969
prk,
Phosphoribulokinase; Alternative locus ID: PMED4_08711.
 
 
 0.965
csoS2
Carboxysome shell protein CsoS2; Alternative locus ID: PMED4_06011.
  
  
 0.934
pgk,
Phosphoglycerate kinase; Alternative locus ID: PMED4_02011; Belongs to the phosphoglycerate kinase family.
    
 0.929
PMM0959
Conserved hypothetical protein; Alternative locus ID: PMED4_10711.
     
  0.900
ntcA
Global nitrogen regulatory protein, CRP family of transcriptional regulators; Alternative locus ID: PMED4_02511.
      
 0.828
psbA
Photosystem II PsbA protein (D1); Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
  
  
 0.813
psaA
Photosystem I PsaA protein; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.
  
  
 0.797
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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