STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBPutative hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (246 aa)    
Predicted Functional Partners:
gloA
LACTOYLGLUTATHIONE LYASE; Alternative locus ID: PMED4_07041.
  
 
 0.935
PMM0558
Conserved hypothetical protein; Alternative locus ID: PMED4_06071.
  
    0.786
ureB
Urease beta subunit; Citation: Palinska et al. (2000) Microbiology 146:3099-3107; Alternative locus ID: PMED4_10761; Belongs to the urease beta subunit family.
      
 0.726
PMM0360
Conserved hypothetical protein; Alternative locus ID: PMED4_03851.
 
    0.707
hisG
Possible ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.
     
 0.672
PMM0561
Putative multidrug efflux ABC transporter; Alternative locus ID: PMED4_06101.
  
  
 0.664
moeB
Molybdopterin biosynthesis protein; BELONGS TO THE HESA/MOEB/THIF FAMILY; Citation: Nohno et al (1988) J. Bacteriol. 170:4097-4102; Alternative locus ID: PMED4_17791.
  
 
 0.645
PMM0557
Conserved hypothetical; Alternative locus ID: PMED4_06061.
       0.624
guaA
Glutamine amidotransferase class-I:GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
 
 0.609
PMM0562
Possible acetyltransferase; Alternative locus ID: PMED4_06111.
       0.580
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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