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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0585Conserved hypothetical protein; Alternative locus ID: PMED4_06341. (525 aa)    
Predicted Functional Partners:
PMM0586
Conserved hypothetical; Alternative locus ID: PMED4_06351.
       0.828
PMM0833
Conserved hypothetical protein; Alternative locus ID: PMED4_09271.
  
  
 0.753
PMM0531
Creatininase; Alternative locus ID: PMED4_05801.
 
    0.720
PMM1303
Conserved hypothetical protein; Alternative locus ID: PMED4_14701.
 
    0.713
PMM0587
Conserved hypothetical; Alternative locus ID: PMED4_06361.
  
    0.706
PMM0588
Conserved hypothetical protein; Alternative locus ID: PMED4_06371.
  
    0.703
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
       0.702
codA
Possible cytosine deaminase; Alternative locus ID: PMED4_14711.
  
    0.642
PMM1595
Conserved hypothetical protein; Alternative locus ID: PMED4_18051.
  
    0.640
PMM1563
Conserved hypothetical protein; Alternative locus ID: PMED4_17731.
  
    0.637
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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