STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0592Lipase family protein; Alternative locus ID: PMED4_06411. (197 aa)    
Predicted Functional Partners:
dgkA
Prokaryotic diacylglycerol kinase; Alternative locus ID: PMED4_01891.
   
 
 0.906
PMM1659
Glycosyl transferase, family 2; Alternative locus ID: PMED4_18691.
   
 
 0.902
fadD
Putative long-chain-fatty-acid--CoA ligase; Alternative locus ID: PMED4_04431.
   
 
 0.845
folB
Possible dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
  
    0.834
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
       0.819
PMM0670
Conserved hypothetical protein; Alternative locus ID: PMED4_07261.
  
  
 0.663
PMM0589
Conserved hypothetical; Alternative locus ID: PMED4_06381.
       0.658
PMM1563
Conserved hypothetical protein; Alternative locus ID: PMED4_17731.
  
     0.480
PMM0585
Conserved hypothetical protein; Alternative locus ID: PMED4_06341.
 
  
 0.440
PMM0588
Conserved hypothetical protein; Alternative locus ID: PMED4_06371.
  
    0.436
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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