STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0604Conserved hypothetical protein; Alternative locus ID: PMED4_06531. (388 aa)    
Predicted Functional Partners:
PMM0603
ABC transporter component, possibly Mn transport; Alternative locus ID: PMED4_06521.
  
    0.833
PMM0602
ABC transporter, ATP binding domain, possibly Mn transporter; Alternative locus ID: PMED4_06511.
  
    0.818
PMM0601
ABC transporter, substrate binding protein, possibly Mn; Alternative locus ID: PMED4_06501; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.812
PMM0679
Putative transcripton factor; Alternative locus ID: PMED4_07351.
  
 
 
 0.811
PMM0600
Conserved hypothetical protein; Alternative locus ID: PMED4_06491.
 
     0.793
psbO
Photosystem II manganese-stabilizing protein; Alternative locus ID: PMED4_02331.
  
 
 0.775
PMM0924
Conserved hypothetical protein; Alternative locus ID: PMED4_10351.
  
     0.773
PMM1595
Conserved hypothetical protein; Alternative locus ID: PMED4_18051.
  
     0.772
PMM0109
Possible POLO box duplicated region; Alternative locus ID: PMED4_01151.
  
     0.760
PMM1563
Conserved hypothetical protein; Alternative locus ID: PMED4_17731.
  
    0.751
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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