STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0612Conserved hypothetical protein; Alternative locus ID: PMED4_06611. (310 aa)    
Predicted Functional Partners:
aroA
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
  
    0.823
glmU
UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.
       0.731
murI
Putative aspartate and glutamate racemases:Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
    0.643
PMM0614
Conserved hypothetical protein; Probable pseudogene due to N-terminal truncation - MIT9313 and WH8102 have a longer form (with other homologs) and also have an additional gene upstream before aroA; Alternative locus ID: PMED4_06631; Belongs to the ComB family.
  
    0.611
PMM0249
Conserved hypothetical protein; Alternative locus ID: PMED4_02541.
  
    0.587
PMM0616
Cell wall hydrolase/autolysin; Alternative locus ID: PMED4_06651.
  
    0.569
PMM0615
Possible nitrilase; Alternative locus ID: PMED4_06641.
  
    0.555
sds
Polyprenyl synthetase; Alternative locus ID: PMED4_06671; Belongs to the FPP/GGPP synthase family.
       0.517
PMM0925
Conserved hypothetical protein; Alternative locus ID: PMED4_10361.
  
  
 0.514
PMM0124
Conserved hypothetical protein in cyanobacteria; Alternative locus ID: PMED4_01301; Belongs to the UPF0367 family.
  
     0.477
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.