STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0646Conserved hypothetical protein; Alternative locus ID: PMED4_06961. (407 aa)    
Predicted Functional Partners:
cobI/cbiL
PRECORRIN-2 C20-METHYLTRANSFERASE; Cobalamin biosynthesis; Citation: Crouzet et al. (1990) J. Bacteriol. 172:5980-5990; Roth et al. (1993) J. Bacteriol. 175:3303-3316; Alternative locus ID: PMED4_04301; Belongs to the precorrin methyltransferase family.
 
 
 0.973
cobA
Putative uroporphyrin-III C-methyltransferase; 2 S-ADENOSYL-L-METHIONINE + UROPORPHYRIN III = 2 S-ADENOSYL-L-HOMOCYSTEINE + SIROHYDROCHLORIN; Citation: Crouzet et al. (199) J. Bacteriol. 172:5968-5979; Blanche et al. (1989) J. Bacteriol. 171:4222-4231 (1989); Alternative locus ID: PMED4_19051; Belongs to the precorrin methyltransferase family.
 
 
 0.970
cbiG/cobJ
Bifunctional cbiH protien and PRECORRIN-3B C17-METHYLTRANSFERASE; Citation: Debussche et al. (1993) J. Bacteriol. 175:7430-7440; Roth et al. (1993) J. Bacteriol. 175:3303-3316; Alternative locus ID: PMED4_17351.
   
 0.962
cobH
Putative Precorrin-8X methylmutase CobH; Citation: Thibaut et al. (1992) J. Bacteriol. 174:1043-1049; Alternative locus ID: PMED4_18561.
  
 0.960
cobL
Putative precorrin-6y methylase; Citation: Blanche et al. (1992) J. Bacteriol. 174:1050-1052; Alternative locus ID: PMED4_14341.
 
  
 0.858
CobN
Cobalamin biosynthetic protein CobN; Citation: Crouzet et al. (1991) J. Bacteriol. 173:6074-6087; Alternative locus ID: PMED4_09901.
 
  
 0.682
PMM0645
FAD linked oxidase, N-terminal; Alternative locus ID: PMED4_06951.
  
    0.664
PMM0644
Putative sulfate transporter; Alternative locus ID: PMED4_06941.
  
    0.588
cobM
PUTATIVE PRECORRIN-4 C11-METHYLTRANSFERASE; Citation: Crouzet et al. (1990) J. Bacteriol. 172:5980-5990; Debussche et al. (1993) J. Bacteriol. 175:7430-7440; Alternative locus ID: PMED4_05071.
 
  
 0.545
PMM0503
Possible precorrin-6X reductase; Alternative locus ID: PMED4_05521.
 
  
 0.492
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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