STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0654Conserved hypothetical protein; Alternative locus ID: PMED4_07051. (144 aa)    
Predicted Functional Partners:
psbP
Photosystem II oxygen evolving complex protein PsbP; Alternative locus ID: PMED4_12441.
  
     0.767
PMM0463
Conserved hypothetical protein; Alternative locus ID: PMED4_05111.
  
    0.766
PMM0667
Conserved hypothetical protein; Alternative locus ID: PMED4_07231.
  
     0.765
PMM0886
Conserved hypothetical protein; Alternative locus ID: PMED4_09971.
  
    0.763
PMM1663
Putative photosystem I assembly related protein Ycf37; Alternative locus ID: PMED4_18731.
  
     0.760
PMM1185
Conserved hypothetical protein; Alternative locus ID: PMED4_13501.
  
     0.759
thf1
Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis.
  
    0.748
rub
Probable rubredoxin; Alternative locus ID: PMED4_03001.
  
    0.727
PMM0865
Conserved hypothetical protein; Alternative locus ID: PMED4_09751.
  
     0.727
PMM0680
Conserved hypothetical protein; Alternative locus ID: PMED4_07361.
  
    0.724
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.