STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0669Conserved hypothetical protein; Alternative locus ID: PMED4_07251. (247 aa)    
Predicted Functional Partners:
PMM0668
Conserved hypothetical protein 46; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.828
PMM0667
Conserved hypothetical protein; Alternative locus ID: PMED4_07231.
       0.819
PMM0666
Possible ABC transporter, ATP-binding component; Alternative locus ID: PMED4_07221.
 
    0.713
PMM1698
Conserved hypothetical protein; Alternative locus ID: PMED4_19091.
 
    0.673
hsp33
Hsp33 protein; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.
  
    0.657
PMM1522
Glycosyl transferase, family 2; Alternative locus ID: PMED4_17321.
 
 
    0.654
hemL,
Glutamate-1-semialdehyde 2,1-aminomutase; Alternative locus ID: PMED4_05321; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
 
      0.633
pds,crtD
Phytoene desaturase; Alternative locus ID: PMED4_01501.
  
     0.522
F4P13.20
Conserved hypothetical protein; Alternative locus ID: PMED4_13331.
  
     0.502
PMM0148
Conserved hypothetical protein; Alternative locus ID: PMED4_01541.
  
     0.496
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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