Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0677Carboxyl-terminal processing protease; Alternative locus ID: PMED4_07331; Belongs to the peptidase S41A family. (429 aa)    
Predicted Functional Partners:
PMM0675
Uracil-DNA glycosylase; Alternative locus ID: PMED4_07311.
  
    0.661
gcpE
GcpE protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
  
    0.620
PMM0672
Putative phosphonate ABC transporter; Alternative locus ID: PMED4_07281.
       0.440
PMM0673
Putative phosphonate binding protein for ABC transporter; Alternative locus ID: PMED4_07291.
       0.440
aspC
Aminotransferases class-I; Possible role in phosphonate metabolism; Alternative locus ID: PMED4_07301.
       0.440
PMM0671
Putative phosphonate ABC transporter; Alternative locus ID: PMED4_07271.
       0.437
moeB
Molybdopterin biosynthesis protein; BELONGS TO THE HESA/MOEB/THIF FAMILY; Citation: Nohno et al (1988) J. Bacteriol. 170:4097-4102; Alternative locus ID: PMED4_17791.
  
    0.437
PMM1189
Conserved hypothetical protein; Alternative locus ID: PMED4_13541.
  
  
 0.419
secD
Preprotein translocase subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
   0.404
PMM0670
Conserved hypothetical protein; Alternative locus ID: PMED4_07261.
       0.401
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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