Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMM0703Conserved hypothetical protein; Alternative locus ID: PMED4_07761. (117 aa)    
Predicted Functional Partners:
PMM1877
Conserved hypothetical protein; Alternative locus ID: PMED4_07771.
       0.636
PMM1563
Conserved hypothetical protein; Alternative locus ID: PMED4_17731.
  
     0.562
PMM1876
Conserved hypothetical protein; Alternative locus ID: PMED4_07751.
       0.506
PMM0702
Possible DUP family; Alternative locus ID: PMED4_07741.
       0.491
secE
Putative preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.485
PMM0124
Conserved hypothetical protein in cyanobacteria; Alternative locus ID: PMED4_01301; Belongs to the UPF0367 family.
  
     0.477
PMM0704
Putative potassium channel, VIC family; Alternative locus ID: PMED4_07781.
       0.468
PMM0117
Conserved hypothetical protein; Alternative locus ID: PMED4_01231.
  
     0.422
PMM1417
Staphylococcus nuclease (SNase) homologues; Alternative locus ID: PMED4_16231.
  
     0.422
PMM1195
Conserved hypothetical protein; Alternative locus ID: PMED4_13601.
  
     0.408
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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