Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phoRTwo-component sensor histidine kinase, phosphate sensing; Alternative locus ID: PMED4_07801. (382 aa)    
Predicted Functional Partners:
phoB
Two-component response regulator, phosphate; Alternative locus ID: PMED4_07791.
 0.999
PMM1619
Two-component response regulator; Alternative locus ID: PMED4_18291.
 
 
 0.875
rpaB
Two-component response regulator; Alternative locus ID: PMED4_01401.
 
 
 0.873
rpaA
Two-component response regulator; Alternative locus ID: PMED4_01341.
 
 
 0.872
PMM1113
Two-component response regulator; Alternative locus ID: PMED4_12591.
  
 
 0.860
PMM0169
Two-component response regulator; Alternative locus ID: PMED4_01751.
 
 0.841
hli16
Possible high light inducible protein; Has EXXNGXXAMXG motif; Citation: Bhaya et al. (2002) FEMS Microbiol Lett 215:209-219; Alternative locus ID: PMED4_09101.
      
 0.814
som
Possible porin; Alternative locus ID: PMED4_07831; Belongs to the OprB family.
   
  
 0.729
PMM1369
GAF domain; Alternative locus ID: PMED4_15401.
 
    
 0.718
glsF,
Ferredoxin-dependent glutamate synthase, Fd-GOGAT; Alternative locus ID: PMED4_17221.
   
  
 0.565
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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