STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0711Putative chromate transporter, CHR family; Alternative locus ID: PMED4_07851. (408 aa)    
Predicted Functional Partners:
PMM0712
Multidrug efflux transporter, MFS family; Alternative locus ID: PMED4_07861.
 
  
 0.777
gap1
Putative glyceraldehyde 3-phosphate dehydrogenase; Alternative locus ID: PMED4_07871; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.733
PMM0714
Bacterial regulatory proteins, ArsR family; Alternative locus ID: PMED4_07881.
     
 0.586
phoR
Two-component sensor histidine kinase, phosphate sensing; Alternative locus ID: PMED4_07801.
   
  
 0.503
phoB
Two-component response regulator, phosphate; Alternative locus ID: PMED4_07791.
      
 0.495
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.