STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0714Bacterial regulatory proteins, ArsR family; Alternative locus ID: PMED4_07881. (126 aa)    
Predicted Functional Partners:
gap1
Putative glyceraldehyde 3-phosphate dehydrogenase; Alternative locus ID: PMED4_07871; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.602
PMM0712
Multidrug efflux transporter, MFS family; Alternative locus ID: PMED4_07861.
  
  
 0.589
PMM0711
Putative chromate transporter, CHR family; Alternative locus ID: PMED4_07851.
     
 0.586
PMM0131
Putative P-type ATPase transporter for copper; Alternative locus ID: PMED4_01371.
  
  
 0.551
PMM1150
Putative thioredoxin reductase; Alternative locus ID: PMED4_13081.
  
  
 0.533
PMM1701
Putative chloride channel; Alternative locus ID: PMED4_19121.
     
 0.486
PMM0716
Putative arsenite transporter, ACR3 family; Alternative locus ID: PMED4_07911.
  
  
 0.428
PMM0512
Putative arsenate reductase; Alternative locus ID: PMED4_05611; Belongs to the ArsC family.
  
  
 0.411
PMM1591
Low molecular weight phosphotyrosine protein phosphatase; Alternative locus ID: PMED4_18011; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.411
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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