Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PMM0717Conserved hypothetical protein; Alternative locus ID: PMED4_07921. (76 aa)    
Predicted Functional Partners:
PMM0671
Putative phosphonate ABC transporter; Alternative locus ID: PMED4_07271.
  
     0.774
PMM0672
Putative phosphonate ABC transporter; Alternative locus ID: PMED4_07281.
 
  
 0.760
PMM0716
Putative arsenite transporter, ACR3 family; Alternative locus ID: PMED4_07911.
  
    0.583
PMM0718
Possible Bacterial regulatory proteins, crp fa; Alternative locus ID: PMED4_07931.
       0.506
PMM0719
Hypothetical; Alternative locus ID: PMED4_07941.
       0.412
PMM0673
Putative phosphonate binding protein for ABC transporter; Alternative locus ID: PMED4_07291.
 
  
 0.401
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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