STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thf1Conserved hypothetical protein; May be involved in photosynthetic membrane biogenesis. (217 aa)    
Predicted Functional Partners:
ndhM
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
    0.778
PMM1663
Putative photosystem I assembly related protein Ycf37; Alternative locus ID: PMED4_18731.
  
    0.776
PMM0886
Conserved hypothetical protein; Alternative locus ID: PMED4_09971.
  
     0.774
PMM1473
Conserved hypothetical protein; Alternative locus ID: PMED4_16821.
  
     0.774
ndhN
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
    0.773
PMM0865
Conserved hypothetical protein; Alternative locus ID: PMED4_09751.
  
     0.771
PMM0463
Conserved hypothetical protein; Alternative locus ID: PMED4_05111.
  
     0.763
PMM0667
Conserved hypothetical protein; Alternative locus ID: PMED4_07231.
  
    0.763
psbP
Photosystem II oxygen evolving complex protein PsbP; Alternative locus ID: PMED4_12441.
  
  
 0.760
PMM1185
Conserved hypothetical protein; Alternative locus ID: PMED4_13501.
  
    0.758
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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