Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0748Possible ABC transporter component; Alternative locus ID: PMED4_08331. (305 aa)    
Predicted Functional Partners:
PMM0749
ABC-transporter, membrane spanning component; Alternative locus ID: PMED4_08341.
 
  
 0.985
PMM0097
Possible RND family outer membrane efflux protein; Alternative locus ID: PMED4_01021.
  
 0.933
PMM0750
ABC transporter, ATP-binding component; Alternative locus ID: PMED4_08351.
 
  
 0.902
pcyA
Ferredoxin-dependent biliverdin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin; Belongs to the HY2 family.
 
     0.848
PMM0751
Conserved hypothetical protein; Alternative locus ID: PMED4_08361.
       0.734
PMM1139
Possible membrane fusion protein; Alternative locus ID: PMED4_12971; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.711
PMM0913
Possible ABC transporter; Alternative locus ID: PMED4_10241.
  
  
 0.688
PMM0443
Conserved hypothetical protein; Alternative locus ID: PMED4_04901.
  
     0.666
PMM0573
Conserved hypothetical protein; Alternative locus ID: PMED4_06221.
  
     0.664
PMM1583
Conserved hypothetical protein; Alternative locus ID: PMED4_17931.
  
    0.656
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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