Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0749ABC-transporter, membrane spanning component; Alternative locus ID: PMED4_08341. (391 aa)    
Predicted Functional Partners:
PMM0748
Possible ABC transporter component; Alternative locus ID: PMED4_08331.
 
  
 0.985
PMM0750
ABC transporter, ATP-binding component; Alternative locus ID: PMED4_08351.
 
 
 0.967
pcyA
Ferredoxin-dependent biliverdin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin; Belongs to the HY2 family.
 
     0.881
PMM0751
Conserved hypothetical protein; Alternative locus ID: PMED4_08361.
  
    0.735
ndhO
Conserved hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.720
PMM0573
Conserved hypothetical protein; Alternative locus ID: PMED4_06221.
  
     0.719
PMM0443
Conserved hypothetical protein; Alternative locus ID: PMED4_04901.
  
     0.693
som
Possible porin; Alternative locus ID: PMED4_07831; Belongs to the OprB family.
  
   
 0.692
cytM
Cytochrome cM; Alternative locus ID: PMED4_12031.
  
    0.686
PMM1139
Possible membrane fusion protein; Alternative locus ID: PMED4_12971; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.679
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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