STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0790Conserved hypothetical protein; Alternative locus ID: PMED4_08761. (178 aa)    
Predicted Functional Partners:
PMM0794
Conserved hypothetical protein; Alternative locus ID: PMED4_08801.
 
    0.881
PMM0795
Conserved hypothetical protein; Alternative locus ID: PMED4_08811.
 
    0.867
PMM0789
Conserved hypothetical protein; Alternative locus ID: PMED4_08751.
  
    0.831
proB
Putative glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
  
    0.828
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
       0.780
PMM0443
Conserved hypothetical protein; Alternative locus ID: PMED4_04901.
  
    0.768
PMM0573
Conserved hypothetical protein; Alternative locus ID: PMED4_06221.
  
     0.763
PMM0953
Conserved hypothetical protein; Alternative locus ID: PMED4_10631.
  
     0.759
PMM0239
Conserved hypothetical protein; Alternative locus ID: PMED4_02441.
  
    0.757
PMM0895
Conserved hypothetical protein; Alternative locus ID: PMED4_10061.
  
    0.756
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.