Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMM0797Possible mRNA binding protein; Alternative locus ID: PMED4_08831. (306 aa)    
Predicted Functional Partners:
hisA
PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE CARBOXAMIDE RIBOTIDE ISOMERASE; Alternative locus ID: PMED4_08821.
       0.637
PMM0795
Conserved hypothetical protein; Alternative locus ID: PMED4_08811.
       0.522
PMM0794
Conserved hypothetical protein; Alternative locus ID: PMED4_08801.
   
   0.520
PMM0604
Conserved hypothetical protein; Alternative locus ID: PMED4_06531.
  
 
   0.496
PMM0792
Conserved hypothetical protein; Alternative locus ID: PMED4_08781.
       0.493
PMM0793
Conserved hypothetical protein; Alternative locus ID: PMED4_08791.
       0.492
PMM0791
Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
       0.488
PMM0790
Conserved hypothetical protein; Alternative locus ID: PMED4_08761.
       0.451
PMM0148
Conserved hypothetical protein; Alternative locus ID: PMED4_01541.
  
     0.442
rfbD
Putative dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 
 0.438
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: high (90%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.