STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
zamPutative acetazolamide conferring resistance protein Zam; Citation: Beuf et al. (1995) Plant Mol. Biol. 27:779-788; Alternative locus ID: PMED4_09421; Belongs to the RNR ribonuclease family. (739 aa)    
Predicted Functional Partners:
rnd
Putative ribonuclease D; Alternative locus ID: PMED4_17941.
   
 
 0.778
PMM0868
Probable ribonuclease II; Alternative locus ID: PMED4_09781.
  
     0.747
PMM0286
NUDIX hydrolase; Alternative locus ID: PMED4_02911.
  
 0.722
PMM0848
Conserved hypothetical protein; Alternative locus ID: PMED4_09431.
       0.664
PMM0849
Conserved hypothetical protein; Alternative locus ID: PMED4_09441.
       0.662
PMM0846
Possible Uncharacterized secreted proteins, Ya; Alternative locus ID: PMED4_09411.
       0.656
PMM0850
Conserved hypothetical protein; Alternative locus ID: PMED4_09451.
  
    0.656
PMM0845
Conserved hypothetical protein; Alternative locus ID: PMED4_09401.
 
    0.638
rps17,
30S Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
 
 
 0.632
rpl10,
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
   
 0.570
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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