Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PMM0848Conserved hypothetical protein; Alternative locus ID: PMED4_09431. (99 aa)    
Predicted Functional Partners:
PMM0849
Conserved hypothetical protein; Alternative locus ID: PMED4_09441.
 
    
0.838
PMM0850
Conserved hypothetical protein; Alternative locus ID: PMED4_09451.
  
    0.820
zam
Putative acetazolamide conferring resistance protein Zam; Citation: Beuf et al. (1995) Plant Mol. Biol. 27:779-788; Alternative locus ID: PMED4_09421; Belongs to the RNR ribonuclease family.
       0.649
PMM0851
Putative CbbY homolog; Alternative locus ID: PMED4_09471.
       0.604
PMM0852
Conserved hypothetical protein; Alternative locus ID: PMED4_09481.
       0.604
PMM1900
Conserved hypothetical protein; Alternative locus ID: PMED4_09461.
       0.551
PMM0846
Possible Uncharacterized secreted proteins, Ya; Alternative locus ID: PMED4_09411.
       0.546
PMM0845
Conserved hypothetical protein; Alternative locus ID: PMED4_09401.
       0.468
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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