STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0903Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein; Alternative locus ID: PMED4_10141. (177 aa)    
Predicted Functional Partners:
rpl28,
50S ribosomal protein L28; Alternative locus ID: PMED4_10131; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.839
PMM0904
Conserved hypothetical protein; Alternative locus ID: PMED4_10151.
  
    0.832
PMM0905
Conserved hypothetical protein; Alternative locus ID: PMED4_10161.
  
    0.829
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
       0.729
psaK
Photosystem I PsaK protein (subunit X); Alternative locus ID: PMED4_10171.
  
    0.684
PMM0899
Possible myo-inositol-1(or 4)-monophosphatase; Alternative locus ID: PMED4_10101; Belongs to the inositol monophosphatase superfamily.
  
    0.565
hisZ
Possible Histidyl-tRNA synthetase; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine (By similarity).
  
    0.553
petF
Ferredoxin, petF-like protein; Alternative locus ID: PMED4_10091.
  
    0.543
PMM1150
Putative thioredoxin reductase; Alternative locus ID: PMED4_13081.
  
 
 0.516
PMM0043
Flavoprotein; Alternative locus ID: PMED4_00431.
  
  
 0.477
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.