Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
PMM0904Conserved hypothetical protein; Alternative locus ID: PMED4_10151. (100 aa)    
Predicted Functional Partners:
PMM0905
Conserved hypothetical protein; Alternative locus ID: PMED4_10161.
 
    0.957
rpl28,
50S ribosomal protein L28; Alternative locus ID: PMED4_10131; Belongs to the bacterial ribosomal protein bL28 family.
 
     0.843
PMM0903
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein; Alternative locus ID: PMED4_10141.
  
    0.820
PMM0924
Conserved hypothetical protein; Alternative locus ID: PMED4_10351.
  
     0.771
PMM1477
Conserved hypothetical; Alternative locus ID: PMED4_16861.
  
    0.769
K8K14.9
Putative protein; Alternative locus ID: PMED4_09161.
  
     0.762
crtQ
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
     0.750
PMM0061
YGGT family, conserved hypothetical integral membrane protein; Alternative locus ID: PMED4_00631.
  
     0.748
PMM0529
Conserved hypothetical protein; Alternative locus ID: PMED4_05781.
  
     0.735
PMM1185
Conserved hypothetical protein; Alternative locus ID: PMED4_13501.
  
     0.727
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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