STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0905Conserved hypothetical protein; Alternative locus ID: PMED4_10161. (111 aa)    
Predicted Functional Partners:
PMM0904
Conserved hypothetical protein; Alternative locus ID: PMED4_10151.
 
    0.960
PMM0903
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergens family protein; Alternative locus ID: PMED4_10141.
  
    0.829
rpl28,
50S ribosomal protein L28; Alternative locus ID: PMED4_10131; Belongs to the bacterial ribosomal protein bL28 family.
       0.828
PMM0061
YGGT family, conserved hypothetical integral membrane protein; Alternative locus ID: PMED4_00631.
  
     0.774
PMM0529
Conserved hypothetical protein; Alternative locus ID: PMED4_05781.
  
     0.768
PMM0680
Conserved hypothetical protein; Alternative locus ID: PMED4_07361.
  
     0.763
pds,crtD
Phytoene desaturase; Alternative locus ID: PMED4_01501.
  
     0.752
pcyA
Ferredoxin-dependent biliverdin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin; Belongs to the HY2 family.
  
    0.749
PMM0620
Conserved hypothetical protein; Alternative locus ID: PMED4_06691.
  
    0.745
PMM1477
Conserved hypothetical; Alternative locus ID: PMED4_16861.
  
    0.734
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.