Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PMM0914Conserved hypothetical protein; Alternative locus ID: PMED4_10251. (190 aa)    
Predicted Functional Partners:
PMM0392
Possible cobalt transport protein; Alternative locus ID: PMED4_04331.
  
 0.978
PMM0666
Possible ABC transporter, ATP-binding component; Alternative locus ID: PMED4_07221.
 
 
 0.961
PMM0125
Possible ABC transporter, ATP-binding component; Alternative locus ID: PMED4_01311.
  
 0.955
PMM0916
Conserved hypothetical protein; Alternative locus ID: PMED4_10271.
 
    0.849
lspA
Putative lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.818
pykF
Pyruvate kinase; Alternative locus ID: PMED4_10231; Belongs to the pyruvate kinase family.
       0.795
PMM0913
Possible ABC transporter; Alternative locus ID: PMED4_10241.
       0.789
PMM0911
Conserved hypothetical protein; Alternative locus ID: PMED4_10221.
  
    0.624
PMM0486
Conserved hypothetical protein; Alternative locus ID: PMED4_05351.
  
     0.607
PMM0502
Conserved hypothetical protein; Alternative locus ID: PMED4_05511.
  
     0.590
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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