Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM0916Conserved hypothetical protein; Alternative locus ID: PMED4_10271. (500 aa)    
Predicted Functional Partners:
PMM0914
Conserved hypothetical protein; Alternative locus ID: PMED4_10251.
 
    0.849
pykF
Pyruvate kinase; Alternative locus ID: PMED4_10231; Belongs to the pyruvate kinase family.
   
 
 0.820
lspA
Putative lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.818
PMM0393
Conserved hypothetical protein; Alternative locus ID: PMED4_04341.
 
 
 0.815
PMM0913
Possible ABC transporter; Alternative locus ID: PMED4_10241.
       0.788
PMM0824
Conserved hypothetical protein; Alternative locus ID: PMED4_09181.
  
     0.760
PMM0239
Conserved hypothetical protein; Alternative locus ID: PMED4_02441.
  
     0.753
PMM0836
Conserved hypothetical protein; Alternative locus ID: PMED4_09301.
  
     0.748
PMM1517
Conserved hypothetical protein; Alternative locus ID: PMED4_17271.
  
    0.725
ndhL
NADH dehydrogenase subunit NdhL (ndhL); NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
    0.703
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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