STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0924Conserved hypothetical protein; Alternative locus ID: PMED4_10351. (244 aa)    
Predicted Functional Partners:
psb28
Possible Photosystem II reaction center Psb28 protein; Alternative locus ID: PMED4_10371; Belongs to the Psb28 family.
 
    0.880
PMM0604
Conserved hypothetical protein; Alternative locus ID: PMED4_06531.
  
     0.773
PMM0904
Conserved hypothetical protein; Alternative locus ID: PMED4_10151.
  
    0.772
PMM0620
Conserved hypothetical protein; Alternative locus ID: PMED4_06691.
  
     0.771
psbO
Photosystem II manganese-stabilizing protein; Alternative locus ID: PMED4_02331.
  
     0.770
K8K14.9
Putative protein; Alternative locus ID: PMED4_09161.
  
     0.770
crtQ
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
    0.763
PMM0679
Putative transcripton factor; Alternative locus ID: PMED4_07351.
  
     0.763
psaE
Photosystem I PsaE protein (subunit IV); Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
    0.760
PMM1477
Conserved hypothetical; Alternative locus ID: PMED4_16861.
  
    0.752
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.