Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
PMM0938Possible Serine hydroxymethyltransferase; Alternative locus ID: PMED4_10491. (151 aa)    
Predicted Functional Partners:
umuC
Putative UmuC protein; Alternative locus ID: PMED4_10481.
  
    0.810
PMM0936
Putative SOS mutagenesis protein UmuD; Alternative locus ID: PMED4_10471; Belongs to the peptidase S24 family.
       0.809
rlmH
Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
  
    0.604
PMM0934
Conserved hypothetical protein; Alternative locus ID: PMED4_10451.
       0.567
folC
Putuative bifunctional Dihydrofolate/Folylpolyglutamate synthase; Citation: Bogner et al. (1987) J. Biol. Chem. 262:12337-12343; Alternative locus ID: PMED4_14691; Belongs to the folylpolyglutamate synthase family.
   
 
  0.517
cobC
Possible alpha-ribazole-5'-P phosphatase; Phosphatase involved in the assembly of the nucleotide loop of cobalamin; Citation: O'Toole et al. (1994) J. Biol. Chem. 269:26503-26511; Alternative locus ID: PMED4_05641; Belongs to the phosphoglycerate mutase family.
     
  0.500
lpdA
Putative dihydrolipoamide dehydrogenase; Alternative locus ID: PMED4_14641.
     
  0.500
gcvP
Glycine cleavage system P-protein; Alternative locus ID: PMED4_18781; Belongs to the GcvP family.
     
  0.500
gcsH,
Putative Glycine cleavage H-protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
  0.500
gcvT
Putative Glycine cleavage T-protein (aminomethyl transferase); The glycine cleavage system catalyzes the degradation of glycine.
     
  0.500
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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