Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
PMM0962Possible Vng0271c; Alternative locus ID: PMED4_10741. (408 aa)    
Predicted Functional Partners:
PMM0961
Glycoside hydrolase family 13; Alternative locus ID: PMED4_10731.
   
 0.988
PMM0960
Conserved hypothetical protein; Alternative locus ID: PMED4_10721.
 
  
 0.976
mreC
Putative rod shape-determining protein; Alternative locus ID: PMED4_18311.
  
 
 0.720
PMM0959
Conserved hypothetical protein; Alternative locus ID: PMED4_10711.
 
     0.694
PMM0458
Conserved hypothetical protein; Alternative locus ID: PMED4_05061.
   
 
 0.646
PMM1082
Possible Helix-turn-helix; Alternative locus ID: PMED4_12281.
   
 
 0.646
cobH
Putative Precorrin-8X methylmutase CobH; Citation: Thibaut et al. (1992) J. Bacteriol. 174:1043-1049; Alternative locus ID: PMED4_18561.
      
 0.535
cobW
Putative cobalamin synthesis protein; Alternative locus ID: PMED4_08631.
      
 0.498
CobN
Cobalamin biosynthetic protein CobN; Citation: Crouzet et al. (1991) J. Bacteriol. 173:6074-6087; Alternative locus ID: PMED4_09901.
      
 0.497
stpA
Putative glucosylglycerolphosphate phosphatase; Alternative locus ID: PMED4_06891.
      
 0.489
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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