STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0976Putative multidrug efflux ABC transporter; Alternative locus ID: PMED4_10921. (329 aa)    
Predicted Functional Partners:
PMM0977
Putative multidrug efflux ABC transporter; Alternative locus ID: PMED4_10931.
 
 
 0.996
PMM0978
Conserved membrane protein, multidrug efflux associated; Alternative locus ID: PMED4_10941.
 
 
 0.996
PMM0666
Possible ABC transporter, ATP-binding component; Alternative locus ID: PMED4_07221.
 
   
0.904
urtE
Putative ATP-binding subunit of urea ABC transport system; Citation: Valladares, A, ML Montesinos, A. Herrero, E. Flores (2002) Mol. Microbiol. 43:703-715; Alternative locus ID: PMED4_10861.
 
 
   
0.901
PMM0434
Possible ABC transporter, ATP binding protein; Alternative locus ID: PMED4_04811.
 
 
   
0.713
PMM0750
ABC transporter, ATP-binding component; Alternative locus ID: PMED4_08351.
 
   
0.695
PMM0975
Conserved hypothetical protein; Alternative locus ID: PMED4_10911.
  
    0.658
PMM1922
Conserved hypothetical protein; Alternative locus ID: PMED4_10901.
       0.549
PMM0764
Possible ABC transporter, ATP binding component; Alternative locus ID: PMED4_08491.
 
 
   
0.547
PMM1031
ABC transporter, ATP binding domain, possibly Mn transport; Alternative locus ID: PMED4_11741.
 
     
0.449
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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