STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM0994GCN5-related N-acetyltransferase; Alternative locus ID: PMED4_11151. (153 aa)    
Predicted Functional Partners:
PMM0995
Hypothetical; Alternative locus ID: PMED4_11161.
  
    0.794
PMM0993
Conserved hypothetical protein; Alternative locus ID: PMED4_11141; Belongs to the peptidase S51 family.
  
    0.675
PMM1928
Conserved hypothetical protein; Alternative locus ID: PMED4_11171.
       0.614
guaA
Glutamine amidotransferase class-I:GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.492
PMM0996
Conserved hypothetical protein; Alternative locus ID: PMED4_11181.
       0.478
rimI
GCN5-related N-acetyltransferase; Alternative locus ID: PMED4_03401.
  
     0.419
PMM0139
Conserved hypothetical protein; Alternative locus ID: PMED4_01451.
 
 
 0.400
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.