STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1023Possible lactate/malate dehydrogenase, alpha/b; Alternative locus ID: PMED4_11611. (83 aa)    
Predicted Functional Partners:
PMM0512
Putative arsenate reductase; Alternative locus ID: PMED4_05611; Belongs to the ArsC family.
   
  
 0.850
dgkA
Prokaryotic diacylglycerol kinase; Alternative locus ID: PMED4_01891.
   
  
 0.812
PMM1025
Putative stress-induced protein OsmC; Alternative locus ID: PMED4_11631.
  
    0.782
PMM1024
Hypothetical; Alternative locus ID: PMED4_11621.
  
    0.778
pgsA
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Alternative locus ID: PMED4_08841; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
  
 0.719
PMM1945
Conserved hypothetical protein; Alternative locus ID: PMED4_11641.
       0.636
PMM1944
Conserved hypothetical protein; Alternative locus ID: PMED4_11601.
       0.541
PMM1127
Possible NAD(P) transhydrogenase beta subunit; Alternative locus ID: PMED4_12751.
   
  
 0.509
pntA-2
Putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2); Alternative locus ID: PMED4_13041.
      
 0.499
pntA-1
Putative nicotinamide nucleotide transhydrogenase, subunit alpha 1 (A1); Alternative locus ID: PMED4_13051.
      
 0.499
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.