STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1031ABC transporter, ATP binding domain, possibly Mn transport; Alternative locus ID: PMED4_11741. (249 aa)    
Predicted Functional Partners:
PMM1029
ABC transporter component, possibly Mn transport; Alternative locus ID: PMED4_11721.
 
 0.991
PMM0603
ABC transporter component, possibly Mn transport; Alternative locus ID: PMED4_06521.
 
 0.947
PMM1032
ABC transporter, substrate binding protein, possibly Mn; Alternative locus ID: PMED4_11751.
 
  
 0.937
PMM0601
ABC transporter, substrate binding protein, possibly Mn; Alternative locus ID: PMED4_06501; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.860
PMM0125
Possible ABC transporter, ATP-binding component; Alternative locus ID: PMED4_01311.
 
   
0.579
PMM1033
Cobalamin synthesis protein/P47K; Alternative locus ID: PMED4_11761.
  
  
 0.560
PMM1030
Ferric uptake regulator family; Alternative locus ID: PMED4_11731; Belongs to the Fur family.
  
  
 0.542
PMM1034
G-protein beta WD-40 repeats; Alternative locus ID: PMED4_11771.
       0.537
PMM0666
Possible ABC transporter, ATP-binding component; Alternative locus ID: PMED4_07221.
 
   
0.528
PMM0976
Putative multidrug efflux ABC transporter; Alternative locus ID: PMED4_10921.
 
     
0.449
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.