Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PMM1032ABC transporter, substrate binding protein, possibly Mn; Alternative locus ID: PMED4_11751. (473 aa)    
Predicted Functional Partners:
PMM1031
ABC transporter, ATP binding domain, possibly Mn transport; Alternative locus ID: PMED4_11741.
 
  
 0.947
PMM0602
ABC transporter, ATP binding domain, possibly Mn transporter; Alternative locus ID: PMED4_06511.
 
  
 0.937
PMM0603
ABC transporter component, possibly Mn transport; Alternative locus ID: PMED4_06521.
 
  
 0.924
PMM1029
ABC transporter component, possibly Mn transport; Alternative locus ID: PMED4_11721.
 
  
 0.889
PMM1033
Cobalamin synthesis protein/P47K; Alternative locus ID: PMED4_11761.
  
  
 0.760
PMM0601
ABC transporter, substrate binding protein, possibly Mn; Alternative locus ID: PMED4_06501; Belongs to the bacterial solute-binding protein 9 family.
  
     0.755
PMM1034
G-protein beta WD-40 repeats; Alternative locus ID: PMED4_11771.
       0.634
isiB
Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
      
 0.459
rps14,
30S Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.440
rpl28,
50S ribosomal protein L28; Alternative locus ID: PMED4_10131; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.412
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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