STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1032ABC transporter, substrate binding protein, possibly Mn; Alternative locus ID: PMED4_11751. (473 aa)    
Predicted Functional Partners:
PMM1031
ABC transporter, ATP binding domain, possibly Mn transport; Alternative locus ID: PMED4_11741.
 
  
 0.937
PMM0602
ABC transporter, ATP binding domain, possibly Mn transporter; Alternative locus ID: PMED4_06511.
 
  
 0.890
PMM0603
ABC transporter component, possibly Mn transport; Alternative locus ID: PMED4_06521.
 
  
 0.889
PMM1029
ABC transporter component, possibly Mn transport; Alternative locus ID: PMED4_11721.
 
  
 0.884
PMM1033
Cobalamin synthesis protein/P47K; Alternative locus ID: PMED4_11761.
  
  
 0.786
PMM0601
ABC transporter, substrate binding protein, possibly Mn; Alternative locus ID: PMED4_06501; Belongs to the bacterial solute-binding protein 9 family.
  
    0.756
fur
Ferric uptake regulator family; Alternative locus ID: PMED4_06871; Belongs to the Fur family.
  
  
 0.756
PMM0370
Putative cyanate ABC transporter, substrate binding protein; Alternative locus ID: PMED4_04031.
      
 0.722
PMM1034
G-protein beta WD-40 repeats; Alternative locus ID: PMED4_11771.
  
    0.657
rps14,
30S Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.440
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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