STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
PMM1073Putative glucose 6-phosphate dehydrogenase effector OpcA; Alternative locus ID: PMED4_12191. (433 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.899
cbiA,cobB
Putative Cobyrinic acid a,c-diamide synthase; BELONGS TO THE SIRTUIN FAMILY; Citation: Tsang and Escalante-Semerena (1996) J. Bacteriol. 178:7016-7019; Alternative locus ID: PMED4_12181.
  
    0.825
PMM0443
Conserved hypothetical protein; Alternative locus ID: PMED4_04901.
  
    0.764
PMM0151
Conserved hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
     0.756
PMM0573
Conserved hypothetical protein; Alternative locus ID: PMED4_06221.
  
    0.755
PMM0600
Conserved hypothetical protein; Alternative locus ID: PMED4_06491.
  
     0.753
PMM0836
Conserved hypothetical protein; Alternative locus ID: PMED4_09301.
  
     0.752
som
Possible porin; Alternative locus ID: PMED4_07831; Belongs to the OprB family.
  
    0.741
PMM1583
Conserved hypothetical protein; Alternative locus ID: PMED4_17931.
  
    0.741
PMM0393
Conserved hypothetical protein; Alternative locus ID: PMED4_04341.
  
     0.736
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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