Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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petHferredoxin-NADP oxidoreductase (FNR); Alternative locus ID: PMED4_12211. (370 aa)    
Predicted Functional Partners:
petF-2
Ferredoxin; Alternative locus ID: PMED4_15201.
    
 0.995
petF
Ferredoxin, petF-like protein; Alternative locus ID: PMED4_10091.
  
 
 0.981
petF-3
Ferredoxin; Alternative locus ID: PMED4_16581.
    
 0.976
petE
Plastocyanin; Alternative locus ID: PMED4_06301.
     
 0.953
cpeB
Phycobilisome protein; Green-light absorbing phycoerythrin of unknown function.
  
 
 0.787
PMM1076
Conserved hypothetical protein; Alternative locus ID: PMED4_12221.
 
    0.726
psaC
Photosystem I subunit PsaC; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, [...]
  
 
 0.703
psbO
Photosystem II manganese-stabilizing protein; Alternative locus ID: PMED4_02331.
  
   
 0.697
rbcL,
Ribulose bisphosphate carboxylase, large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.
      
 0.657
petC
Rieske iron-sulfur protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. Belongs to the Rieske iron-sulfur protein family.
   
  
 0.656
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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