Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PMM1076Conserved hypothetical protein; Alternative locus ID: PMED4_12221. (178 aa)    
Predicted Functional Partners:
petH
ferredoxin-NADP oxidoreductase (FNR); Alternative locus ID: PMED4_12211.
 
    0.726
psbO
Photosystem II manganese-stabilizing protein; Alternative locus ID: PMED4_02331.
  
     0.712
PMM0620
Conserved hypothetical protein; Alternative locus ID: PMED4_06691.
  
     0.668
PMM0148
Conserved hypothetical protein; Alternative locus ID: PMED4_01541.
  
     0.663
psbP
Photosystem II oxygen evolving complex protein PsbP; Alternative locus ID: PMED4_12441.
  
     0.661
PMM0529
Conserved hypothetical protein; Alternative locus ID: PMED4_05781.
  
     0.638
PMM0447
Conserved hypothetical protein; Alternative locus ID: PMED4_04941.
    
  0.596
PMM1272
Conserved hypothetical protein; Alternative locus ID: PMED4_14381.
  
     0.577
PMM0296
Conserved hypothetical protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.570
PMM0654
Conserved hypothetical protein; Alternative locus ID: PMED4_07051.
  
     0.560
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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