STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1085Phosphatidate cytidylyltransferase; Alternative locus ID: PMED4_12311; Belongs to the CDS family. (285 aa)    
Predicted Functional Partners:
uppS
Undecaprenyl pyrophosphate synthetase (UPPS); Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
  
 0.965
pgsA
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Alternative locus ID: PMED4_08841; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.944
plsC
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; Alternative locus ID: PMED4_01441.
  
 
 0.915
dgkA
Prokaryotic diacylglycerol kinase; Alternative locus ID: PMED4_01891.
  
 
 0.914
cad
Orn/Lys/Arg decarboxylases family 1; Possible assignment; Alternative locus ID: PMED4_12301.
  
    0.826
PMM1083
Possible kinase; Alternative locus ID: PMED4_12291.
       0.656
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.653
panC,
Putative bifunctional enzyme; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the C-terminal section; belongs to the cytidylate kinase family. Type 1 subfamily.
 
   
 0.617
tpi,
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
  
 0.580
PMM1108
Phospholipid and glycerol acyltransferase (from 'motifs_6.msf'); Alternative locus ID: PMED4_12541.
  
 
 0.580
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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