STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMM1099ABC transporter, multidrug efflux family; Alternative locus ID: PMED4_12451. (590 aa)    
Predicted Functional Partners:
pstB
Putative phosphate ABC transporter, ATP binding subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.900
PMM1101
Putative ATP-dependent RNA helicase; Alternative locus ID: PMED4_12471; Belongs to the DEAD box helicase family.
   
   0.835
PMM1100
Hypothetical; Alternative locus ID: PMED4_12461.
  
    0.821
PMM0434
Possible ABC transporter, ATP binding protein; Alternative locus ID: PMED4_04811.
 
 
   
0.801
futC,
ABC transporter, ATP binding component, possibly iron transporter; Alternative locus ID: PMED4_08891.
 
   
0.737
PMM0666
Possible ABC transporter, ATP-binding component; Alternative locus ID: PMED4_07221.
 
    
0.584
recD
Possible exodeoxyribonuclease V 67 kD polypeptide; Alternative locus ID: PMED4_12481.
  
    0.516
recB
Possible UvrD/REP helicase subunit B; Alternative locus ID: PMED4_12491.
  
    0.507
PMM1111
Glutaredoxin-related protein; Alternative locus ID: PMED4_12571; Belongs to the glutaredoxin family. Monothiol subfamily.
 
     0.504
PMM1104
Conserved hypothetical protein; Alternative locus ID: PMED4_12501.
  
  
 0.498
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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