Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PMM1109Conserved hypothetical protein; Alternative locus ID: PMED4_12551. (187 aa)    
Predicted Functional Partners:
PMM1108
Phospholipid and glycerol acyltransferase (from 'motifs_6.msf'); Alternative locus ID: PMED4_12541.
 
     0.846
PMM1111
Glutaredoxin-related protein; Alternative locus ID: PMED4_12571; Belongs to the glutaredoxin family. Monothiol subfamily.
  
    0.807
PMM1110
BolA-like protein; Alternative locus ID: PMED4_12561; Belongs to the BolA/IbaG family.
       0.806
PMM1106
Conserved hypothetical protein; Alternative locus ID: PMED4_12521.
 
     0.797
PMM0196
Conserved hypothetical protein; Alternative locus ID: PMED4_02021.
  
   
 0.783
som
Possible porin; Alternative locus ID: PMED4_07831; Belongs to the OprB family.
  
     0.775
PMM0239
Conserved hypothetical protein; Alternative locus ID: PMED4_02441.
  
     0.774
PMM0268
Conserved hypothetical protein; Alternative locus ID: PMED4_02731.
  
    0.774
PMM0443
Conserved hypothetical protein; Alternative locus ID: PMED4_04901.
  
     0.774
PMM0573
Conserved hypothetical protein; Alternative locus ID: PMED4_06221.
  
     0.774
Your Current Organism:
Prochlorococcus marinus pastoris
NCBI taxonomy Id: 59919
Other names: P. marinus subsp. pastoris str. CCMP1986, Prochlorococcus marinus MED4, Prochlorococcus marinus subsp. pastoris str. CCMP1378, Prochlorococcus marinus subsp. pastoris str. CCMP1986, Prochlorococcus sp. CCMP1378, Prochlorococcus sp. MED4
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